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Table 1 Numbers of singletons and ohnologs and numbers of their transcripts in Ensembl and predicted alternative splicing (AS) forms with RNA-seq data

From: The divergence of alternative splicing between ohnologs in teleost fishes

 

Singletons

Ohnologs

 

Gene number

Transcript number

Gene pair

Transcript number

Zebrafish

3792

2.05 ± 0.02

581

2.22 ± 0.04

Medaka

3362

1.33 ± 0.01

497

1.31 ± 0.02

Stickleback

3622

1.37 ± 0.01

548

1.39 ± 0.02

 

Gene number

AS number

Gene pair

AS number

Zebrafish

3777

4.47 ± 0.07

578

4.79 ± 0.13

Medaka

3349

6.37 ± 0.10

492

6.23 ± 0.18

Stickleback

3598

5.96 ± 0.09

542

6.74 ± 0.20