Fig. 4

Comparisons of new and previously published phylogenomic datasets for Cnidaria reveal significant differences. a Histograms showing the distributions of alignment lengths for partitions included in the OF-PTP_62tx, AG_62tx and two previously published phylogenomic matrices [11, 10]. b The number of taxa plotted against the average taxon occupancy for each dataset. Size of each circle is based on number of partitions (see inset in a). p denotes preliminary datasets. c Venn diagram indicating the overlap in N. vectensis gene identities from partitions present in each dataset. The most similar datasets are AG_62tx and that from Zapata et al. [10], which are both based on Agalma [45]. d Composition, enrichment and depletion of GO terms associated with the cellular component category from the N. vectensis sequences present across partitions. Left, the composition of unique cellular component terms are shown as bar plots for each dataset. Only terms that are significantly enriched or depleted relative to their frequencies in the N. vectensis protein set in at least one dataset are shown. Right, the identities of each cellular component term and their enrichment or depletion for each dataset. Black = depleted. White = enriched. Grey = not significant. For b-c, datasets are color coded as in a