Haplotype | Taxon | Designation* | Geographic origin | Genbank accession numbers | Author |
---|---|---|---|---|---|
H01 | Loxodonta africana africana | Angola1 | Angola | AY741072 | Debruyne 2005 |
H02 (2) | L. a. africana | Botswana1, BOT4 | Botswana | AY741074, AF106230 | Debruyne 2005, Nyakaana et al. 2002 |
H03 (3) | L. a. africana, L. a. cyclotis | BOT2, BOT21, DRC4 | Botswana, DRC | AF106228, AF106234, AY359275 | Nyakaana et al. 2002, Debruyne 2005 |
H04 (2) | L. a. africana | BOT9, Zimbabwe2 | Botswana, Zimbabwe | AF106231, AY741329 | Nyakaana et al. 2002, Debruyne 2005 |
H05 | L. a. africana | BOT15 | Botswana | AF106232 | Nyakaana et al. 2002 |
H06 (3) | L. a. africana, L. a. cyclotis | BOT16, DRC1, Zimbabwe4 | Botswana, DRC, Zimbabwe | AF106233, AY359277, AY742799 | Nyakaana et al. 2002, Debruyne 2005 |
H07 (4) | L. a. cyclotis | Bmbo6, Dja39, CAR3214, CAR394 | Cameroon, CAR | AF527653, AF527647 | Eggert et al. 2002, this study |
H08 | L. a. cyclotis | Cameroon1 | Cameroon | AY359267 | Debruyne 2005 |
H09 (4) | L. a. cyclotis | Cameroon2, Bmbo1, Bmbo37, NYO0310 | Cameroon, Gabon | AY359269, AF527646, AF527649 | Debruyne 2005, Eggert et al. 2002, this study |
H10 (7) | L. a. cyclotis | Bmbo16, Bmbo43, CAR274, CAR297, Congo2, NN0713, NN2911 | Cameroon, CAR, CR | AF527648, AF527650, AY359268 | Eggert et al. 2002, Debruyne 2005, this study |
H11 | L. a. cyclotis | Dja34 | Cameroon | AF527651 | Eggert et al. 2002 |
H12 (3) | L. africana, L.a. fricana, L. a. cyclotis | DRC13**, B1, DRC9 | DRC, Cameroon | AY741081, AY359279, AF527654, | Debruyne 2005, Eggert et al. 2002 |
H13 (2) | L. a. africana | B7, Waza15 | Cameroon | AF527655, AF527659 | Eggert et al. 2002 |
H14 (3) | L. a. africana | B8, Waza10, Sudan1 | Cameroon, Sudan | AF527656, AF527658, AY741073 | Eggert et al. 2002, Debruyne 2005 |
H15 (2) | L. a. africana | Waza27, Mali2 | Cameroon, Mali | AF527660, AF527666 | Eggert et al. 2002 |
H16 (4) | L. a. cyclotis | CAR3622, NN059, NN279, NN3014 | CAR, CR | This study | |
H17 (2) | L. a. cyclotis | CAR3315, CAR381 | CAR | This study | |
H18 (4) | L. a. cyclotis | CAR5712, AFE82lan, MDC012, NOG053, | CAR, Gabon | This study | |
H19 | L. a. cyclotis | CAR1 | CAR | AY359272 | Debruyne 2005 |
H20 | L. a. cyclotis | CAR309 | CAR | This study | |
H21 | L. a. cyclotis | CAR3519 | CAR | This study | |
H22 (5) | L. a. africana | Chad1, K68, RVV15, Mole13, WA6 | Chad, Ghana | AY741080, AF527643, AF527641, AF527676, AF106243 | Eggert et al. 2002, Debruyne 2005, Nyakaana et al. 2002 |
H23 (10) | L. a. cyclotis | NN3218, Lan027, LOP067, LOP51a14, NOG014, NOG025, NOG026, Mpa01, Mpa028, RAB0113 | RC, Gabon | This study | |
H24 | L. a. cyclotis | Congo1 | RC | AY359266 | Debruyne 2005 |
H25 (2) | L. a. cyclotis | CKT04a14, RAB275 | RC, Gabon | This study | |
H26 | L. a. cyclotis | DRC2 | DRC | AY359270 | Debruyne 2005 |
H27 (4) | L. a. africana and L. a. cyclotis | KV8, MF1, MF5, DRC3 | Uganda, DRC | AF106206, AF106209, AF106210, AY359271 | Nyakaana et al. 2002, Debruyne 2005 |
H28 (2) | L. a. cyclotis | DRC6, DRC8 | DRC | AY359273, AY359274 | Debruyne 2005 |
H29 | L. a. cyclotis | DRC5 | DRC | AY359276 | Debruyne 2005 |
H30 (2) | L. a. africana | DRC11, AM1 | DRC, Kenya | AY741078, AF106217 | Nyakaana et al. 2002, Debruyne 2005 |
H31 (2) | L. africana and L. a. africana | DRC17**, QE13 | DRC, Uganda | AY742802, AF106213 | Nyakaana et al. 2002, Debruyne 2005 |
H32 (2) | L. a. cyclotis | IVI1011, RAB067 | Gabon | This study | |
H33 (11) | L. a. cyclotis | Igl032, AFE85Igl, AFE86Igl, AFE88Igl, IVI1012, IVI043, LOA0310, LOP146, Mpa0319, RAB0215, WAK0410 | Gabon | This study | |
H34 (3) | L. a. cyclotis | Lan015, Lan15911, RAB131 | Gabon | This study | |
H35 (5) | L. a. cyclotis | Lan1566, IVI05a6, IVI05b8, RAB032, WAK0817 | Gabon | This study | |
H36 | L. a. cyclotis | Lan16014 | Gabon | This study | |
H37 (3) | L. a. cyclotis | Gabon2, LOP0710, PBA023 | Gabon | AY359265 | Debruyne 2005, this study |
H38 (8) | L. a. cyclotis | IVI06b2, Kes0721, Kes0819, LOA068, AFE79LOP, PBA0510, RAB044, RAB1118 | Gabon | This study | |
H39 (4) | L. a. cyclotis | Kes0211, Kes0314, Kes0517, PBA0714 | Gabon | This study | |
H40 | L. a. cyclotis | Gabon1 | Gabon | AY359278 | Debruyne 2005 |
H41 | L. a. cyclotis | NOG0810 | Gabon | This study | |
H42 | L. a. cyclotis | PBA0612 | Gabon | This study | |
H43 | L. a. cyclotis | IVI05a5 | Gabon | This study | |
H44 (3) | L. a. cyclotis | Bia3, Bia69, Liberia1 | Ghana, Liberia | AF527677, AF527680, AY741079 | Eggert et al 2002, Debruyne 2005 |
H45 | L. a. cyclotis | Bia48 | Ghana | AF527678 | Eggert et al 2002 |
H46 (6) | L. a. cyclotis and L. a. africana | Bia64, RVV22, Mole9, WA3, WA14, Mali7 | Ghana, Mali | AF527679, AF527642, AF527675, AF106242, AF106245, AF527667 | Eggert et al 2002, Nyakaana et al 2002 |
H47 (2) | L. a. africana | Mole3, Mali14 | Ghana, Mali | AF527674, AF527668 | Eggert et al 2002 |
H48 | L. a. africana | Mole33 | Ghana | AF527683 | Eggert et al 2002 |
H49 (2) | L. a. cyclotis | Tai6, Tai17 | Ivory Coast | AF527670, AF527671 | Eggert et al 2002 |
H50 (2) | L. a. cyclotis | Tai19, Tai29 | Ivory Coast | AF527672, AF527673 | Eggert et al 2002 |
H51 | L. a. africana | IvoryCoast1 | Ivory Coast | AY741327 | Debruyne 2005 |
H52 (2) | L. a. africana | SouthAfrica3, Zimbabwe1 | South Africa, Zimbabwe | AY741320, AY741321 | Debruyne 2005 |
H53 | L. a. africana | MM4 | Kenya | AF106214 | Nyakaana et al 2002 |
H54 | L. a. africana | MM19 | Kenya | AF106215 | Nyakaana et al 2002 |
H55 | L. a. africana | MM20 | Kenya | AF106216 | Nyakaana et al 2002 |
H56 | L. a. africana | AM2 | Kenya | AF106218 | Nyakaana et al 2002 |
H57 | L. a. africana | AM10 | Kenya | AF106219 | Nyakaana et al 2002 |
H58 | L. a. africana | AM12 | Kenya | AF106220 | Nyakaana et al 2002 |
H59 | L. a. africana | SA8 | Kenya | AF106221 | Nyakaana et al 2002 |
H60 | L. a. africana | Mali28 | Mali | AF527669 | Eggert et al 2002 |
H61 | L. a. africana | Mozambique1 | Mozambic | AY741076 | Debruyne 2005 |
H62 (5) | L. a. africana | Namibia1, Addo5, Uganda1, QE1, Zimbabwe10 | Namibia, South Africa, Uganda, Zimbabwe | AY741325, AF527682, AF106211, AY741323, AY742800 | Nyakaana et al 2002, Eggert et al 2002, Debruyne 2005 |
H63 | L. a. africana | KH2 | Namibia | AF106239 | Nyakaana et al 2002 |
H64 | L. a. africana | Addo1 | South Africa | AF527681 | Eggert et al 2002 |
H65 | L. a. africana | KG1 | South Africa | AF106240 | Nyakaana et al 2002 |
H66 (3) | L. a. africana | KG2, Tanzania2, Zimbabwe7 | South Africa, Tanzania, Zimbabwe | AF106241, AY741070, AY741067 | Nyakaana et al 2002, Debruyne 2005 |
H67 | L. a. africana | Tanzania1 | Tanzania | AY742801 | Debruyne 2005 |
H68 (4) | L. a. africana | QE4, Zambia1, Af9, Af10 | Uganda, Zambia, Kenya | AF106212, AY741328, AF527639, AF527640 | Nyakaana et al 2002, Eggert et al 2002, Debruyne 2005 |
H69 (2) | L. a. africana | Uganda2, KV1 | Uganda | AY741077, AF106203 | Nyakaana et al 2002, Debruyne 2005 |
H70 | L. a. africana | KV2 | Uganda | AF106204 | Nyakaana et al 2002 |
H71 | L. a. africana | KV7 | Uganda | AF106205 | Nyakaana et al 2002 |
H72 | L. a. africana | KV17 | Uganda | AF106207 | Nyakaana et al 2002 |
H73 | L. a. africana | KV28 | Uganda | AF106208 | Nyakaana et al 2002 |
H74 | L. a. africana | WC2 | Namibia | AF106235 | Nyakaana et al 2002 |
H75 | L. a. africana | WC4 | Namibia | AF106236 | Nyakaana et al 2002 |
H76 | L. a. africana | WC6 | Namibia | AF106237 | Nyakaana et al 2002 |
H77 | L. a. africana | WC13 | Namibia | AF106238 | Nyakaana et al 2002 |
H78 | L. a. africana | WA11 | Ghana | AF106244 | Nyakaana et al 2002 |
H79 | L. a. africana | AF8 | Kenya | AF527638 | Eggert et al 2002 |
H80 | L. a. africana | ZBE1 | Zimbabwe | AF106222 | Nyakaana et al. 2002 |
H81 | L. a. africana | ZBE2 | Zimbabwe | AF106223 | Nyakaana et al. 2002 |
H82 | L. a. africana | ZBE3 | Zimbabwe | AF106224 | Nyakaana et al. 2002 |
H83 | L. a. africana | ZBE4 | Zimbabwe | AF106225 | Nyakaana et al. 2002 |
H84 | L. a. africana | ZBE5 | Zimbabwe | AF106226 | Nyakaana et al. 2002 |
H85 | L. a. africana | ZBE6 | Zimbabwe | AF106227 | Nyakaana et al. 2002 |
H86 | L. a. africana | Zimbabwe3 | Zimbabwe | AY741069 | Debruyne 2005 |
H87 | L. a. africana | Zimbabwe6 | Zimbabwe | AY741071 | Debruyne 2005 |
H88 | L. a. africana | Zimbabwe5 | Zimbabwe | AY741322 | Debruyne 2005 |