Skip to main content

Advertisement

Table 3 Top hits of 16 L. vannamei TE families in querying against chromosome and HTGS databases

From: Close ecological relationship among species facilitated horizontal transfer of retrotransposons

  Taxon Organism E-value Identity (%) Query coverage (%)
BEL-1_LVa-I Brachiopoda Lingula anatina 8.63e-30 70 6
Gypsy-14_LVa-I Mollusca Lottia gigantea 9.36e-29 70 6
Gypsy-17_LVa Actinopterygii Danio rerio 3.21e-11 84 3
Gypsy-3_LVa-LTR Actinopterygii Salmo salar 1.00e-43 70 30
Gypsy-4_LVa-I Nematoda Trichinella spiralis 1.90e-23 72 7
Penelope-6_LVa Arthropoda Limulus polyphemus 7.99e-14 73 6
RTE-1_LVa Actinopterygii Oryzias latipes 1.86e-28 66 22
RTE-2_LVa Echinodermata Strongylocentrotus purpuratus 1.31e-45 65 21
RTE-3_LVa Echinodermata Strongylocentrotus purpuratus 6.34e-48 80 7
Gypsy-18_LVa, Gypsy-5_LVa-I , Nimb-1_LVa, Nimb-2_LVa, Penelope-1_LVa, Penelope-3_LVa, Penelope-8_LVa have no significant hit (E-value < 1e-10)