Skip to main content
Fig. 4 | BMC Evolutionary Biology

Fig. 4

From: Deciphering the recent phylogenetic expansion of the originally deeply rooted Mycobacterium tuberculosis lineage 7

Fig. 4

List of specific deletions identified in all lineage 7 isolates included in this study. Deletions were identified by calculating the coverage rate throughout the genome using bedtools on the alignment files generated by samtools. Each line corresponds to the coverage rate for each strain. The gray line corresponds to a control strain that does not include any of the identified deletions specific for the lineage isolates. For each deletion, the information is: genomic coordinates, size of the deleted region and the genes concerned.

Back to article page