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Table 6 Parameter estimates and log-likelihood values under models of variable w ratios among sites for Esi0130_0068

From: Molecular evolution of candidate male reproductive genes in the brown algal model Ectocarpus

Model

p

Parameters

l

d N /d S

Positively selected sites BEB (Pr > 90 %)

M0: one ratio

1

ω = 0.65860

–1812.54

=ω

None

M1a: nearly neutral

2

p0 = 0.45184, ω0 = 0.08242, p1 = 0.54816, ω1 = 1.00000

–1808.23

0.5854

Not allowed

M2a: positive selection

4

p0 = 0.93134, ω0 = 0.45793, p1 = 0.00000, ω1 = 1.00000, p2 = 0.06866, ω2 = 4.06616

–1804.93

0.7057

155

M3: discrete

5

p0 = 0.88395, ω0 = 0.45793, p1 = 0.04738, ω1 = 0.45796, p2 = 0.06866, ω2 = 4.06615

–1804.93

0.7057

155, 626, 821

M7: beta

2

p = 0.02684 q = 0.01590

–1808.29

0.6092

Not allowed

M8: beta& ω

4

p0 = 0.93179 p = 83.98499

q = 99.00000, (p1 = 0.06821)

ω = 4.07807

–1804.93

0.7058

155