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Table 1 List of coding sequences analyzed with corresponding accession numbers

From: Evolution of the highly networked deubiquitinating enzymes USP4, USP15, and USP11

Species

USP4

USP15

USP11

Human

NC_000003

NC_000012

NC_000023

Gorilla

NC_018427

NC_018436

–

Chimpanzee

NC_006490

NC_006479

NC_006491

Rhesus monkey

NC_007859

NC_007868

NC_007878

Dog

NC_006602

NC_006592

NC_006621

Cat

NC_018724

NC_018729

NC_018741

Cow

AC_000179

AC_000162

AC_000187

Whale

NW_006725543

NW_006713252

NW_006727531

Mouse

NC_000075

NC_000076

NC_000086

Rat

NC_005107

NC_005106

NC_005120

Opossum

NC_008806

NC_008808

NC_008809

Little brown bat

NW_005872009

NW_005871371

NW_005871244

European shrew

NW_004545936

NW_004545859

NW_004545915

Star-nosed mole

NW_004567105

NW_004567135

NW_004567128

Armadillo

NW_004467831

NW_004502972

NW_004483933

Platypus

NW_001794469

NW_001688637

NW_001598857

Mallard

NW_004677124

NW_004676435

–

Zebra finch

NC_011476

NC_011463

–

Chicken

NC_006099

NC_006088

–

Alligator

–

NW_006225048

–

Python

NW_006532620

NW_006535771

NW_006532331

Green sea turtle

NW_006635848

NW_006644513

NW_006577128

Soft-shelled turtle

NW_005853649

NW_005858962

–

Anole

NC_014777

NC_014780

NC_014777

Xenopus

NW_004668239

NW_004668234

–

Coelacanth

NW_005819144

NW_005819645

NW_005821768

Gar

NC_023183

NC_023186

–

Zebrafish

NC_007117

NW_003336534

NC_007119

Zebra mbuna

NW_004531721

NW_004531746

NW_004531844

Guppy

NC_024335

NC_024353

NC_024337

Fugu

NC_018908

NC_018907

NC_018892

Medaka

XM_004068480

NW_004090515

NW_004095165

Shark

NW_006890068

NW_006890092

–

Lancelet

–

NW_003101526

–

Tunicate

–

NC_020166

–

Acorn worm

NW_003149765

NW_003123910

–

Sea urchin

NW_003577258

–

–

Sea slug

NW_004797520

–

–

Hydra

–

NW_004173592

–

Sea sponge

NW_003546314

–

–

Lamprey

lamprey_JL9400, lamprey_JL10812

Little skate

LS-transcriptB2-ctg62960, LS-transcriptB2-ctg14739

Owl limpet

gw1.79.7.1