Table 1 Sequence characterization and evolutionary model used in phylogenetic analyses for 35 Leptodactylinae species
16S | 12S | Cytochrome B | Rhodopsin 1 | |
|---|---|---|---|---|
Original length (bp) | 517 | 435 | 405 | 330 |
Final length (bp) | 503 | 423 | 270 | 330 |
Base frequencies | ||||
%A | 0.314 | 0.308 | 0.211 | 0.234 |
%C | 0.230 | 0.262 | 0.216 | 0.283 |
%G | 0.210 | 0.203 | 0.230 | 0.195 |
%T | 0.246 | 0.227 | 0.343 | 0.288 |
Parsimony informative characters (PIC) | 116 | 107 | 28 | 44 |
PIC without outgroup | 108 | 101 | 27 | 27 |
Best fit model | GTR+I+G | GTR+I+G | TIM2+I+G | TPM3uf+I+G |
Model likelihood | 2,904.84 | 2,865.12 | 868.58 | 1,081.27 |