Locus (Genbank Accession no.) | Primer sequence (5′-3′) (F: [dye]-forward; R: reverse) | Repeat motif (cloned allele) | Size range (bp) | No. of alleles | H0/HEFinland | H0/HEGreece |
---|---|---|---|---|---|---|
Tvap-1-1C | F: [6-FAM]- GAGACTCCACGATGTCTGTC | (GT)6 GG(GT)9 | 195-215 | 3 | 0.469/0.499* | 0.455/0.461 |
(GF112015) | R: TTCCCCTATCGTATGTTCAC | |||||
Tvap-1-2 | F: [VIC]- CTGTGAATCCCTCAGAAATC | (GT)6 | 233-236 | 2 | 0.094/0.108 | 0.299/0.308 |
(GF112025) | R: TGACCTCTCTCAGGCTTTTA | |||||
Tvap-3-1 | F: [PET]- GAGATGGACAAACTACAACG | (AC)15 | 228-230 | 2 | 0.246/0.437* | 0.268/0.355* |
(GF112016) | R: GATTGGATGTCGTGGTTG | |||||
Tvap-3-2 | F: [6-FAM]- GGAGGTCATTACTCATTTCG | (AC)6 | 170-182 | 4 | 0.401/0.405 | 0.522/0.581 |
(GF112017) | R: CATAAATTTTCGGCTCACTC | |||||
Tvap-3-3 | F: [VIC]- CGCAAATCATACTTCCTTTC | (CA)5 | 235-237 | 2 | 0.417/0.412 | 0.496/0.459 |
(GF112019) | R: AAATACAGGCGACTCATGTC | |||||
Tvap-4-2 | F: [NED]- GGTGGTATTGTGGCGTC | (GA)29 | 298-314 | 7 | 0.446/0.468 | 0.585/0.667 |
(GF112027) | R: CTGCCTCTTATGACTCTTCC | |||||
Tvap-1-4 | F: [PET]- GATTTAGCCCAGTTCATTTG | (TG)5 | 265-267 | 2 | 0.091/0.097 | 0.137/0.179* |
(GF112020) | R: CTTCAGTTGAGCTGCTGATG | |||||
Tvap-1-5 | F: [6-FAM]- CAGTTGTGGTAGTGTGGTG | (TG)12 | 124-146 | 10 | 0.416/0.411 | 0.703/0.757 |
(GF112028) | R: CTCATCGGCTCATACATTC | |||||
Tvap-2-2C | F: [VIC]- CTGAAAGTCTTATTAGAGCC | (TC)8 GC (TC)10 | 210-220 | 6 | 0.568/0.55 | 0.588/0.608 |
(GF112021) | R: CTAACTGATTCCATAGTCG |