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Table 1 Control region mtDNA haplotypes (with numbered polymorphic sites), haplotype frequencies, shared haplotypes and indices of population diversity for Carcharhinus obscurus.

From: The extent of population genetic subdivision differs among four co-distributed shark species in the Indo-Australian archipelago

C. obscurus haplotypes (375 bases) Total N = 28

Haplotype

4

6

1

1

1

2

3

3

3

3

Indonesia

(n = 8)

West Australia

(n = 13)

East Australia

(n = 7)

 

5

3

1

7

9

0

0

1

1

2

   
   

8

5

3

0

9

2

3

2

   

CO1

A

T

G

T

A

C

A

A

T

T

0.25

-

-

CO2

.

.

.

C

G

.

.

.

.

.

0.125

-

-

CO3

.

.

A

C

G

T

.

.

.

.

0.375

0.846

0.571

CO4

.

C

A

C

G

T

G

G

.

.

0.125

-

-

CO5

.

.

A

C

G

T

G

.

A

C

0.125

-

-

CO6

.

C

A

C

G

T

.

.

.

.

-

-

0.143

CO7

G

C

A

C

G

T

.

.

.

.

-

0.154

0.286

Number of haplotypes

5

2

3

Number of polymorphic sites

10

2

2

Nucleotide diversity per location (within population, %)

1.044 ± 0.666

0.160 ± 0.153

0.297 ± >0.250

Haplotype diversity per location (within population)

0.857 ± 0.108

0.282 ± 0.142

0.667 ± 0.160

  1. Key: Haplotype CO1 has Genbank accession number EF363709.