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Table 2 Group II Nme proteins: names and symbols by species, accession numbers and corresponding chromosomal location

From: Nme protein family evolutionary history, a vertebrate perspective

 

Species

Name

Other names

GenBank Acc #

Ensembl Acc #

Localisation

Position

 

C. intestinalis

Nme5

ci-ndk/dpy26

NP_001154961

ENSCINP00000008954†

Chr 7q

1,031,987-1,036,756

 

B. floridae

Nme5

 

XP_002211295

 

Chr Un

731,166,868-731,169,160

 

P. marinus

Nme5

 

DW023083*

 

Contig18268

2,311-13,400

 

H. sapiens

NME5

NDK-H5; NM23-H5; IPIA-β

NP_003542

ENSP00000265191

Chr 5

137,478,761-137,503,031

 

M. musculus

Nme5

NDK-M5; Nm23-M5

NP_542368

ENSMUSP00000078269

Chr 18

34,722,295-34,738,760

Nme5

G. gallus

Nme5

NDP kinase homolog 5; IPIA-β

XP_414687

ENSGALP00000022919

Chr 13

14,517,448-14,548,478

 

A. carolinensis

Nme5

NDP kinase homolog 5; IPIA-β

 

ENSACAP00000016699

Scaffold_29

3,794,500-3,804,710

 

X. tropicalis

Nme5

NDPK homolog 5; IPIA-β

NP_001072619

ENSXETP00000008322

Scaffold_65

2,613-8,494

 

D. rerio

Nme5

zgc:92812

NP_001002516

ENSDARP00000060997

Chr 14

55,814,542-55,821,523

 

O. latipes

Nme5

NDP kinase homolog 5; IPIA-β

 

ENSORLP00000006672

Chr 10

13,043,372-13,046,033

 

G. aculeatus

Nme5

NDP kinase homolog 5; IPIA-β

 

ENSGACP00000023932

GroupIV

11,477,537-11,479,481

 

T. rubripes

Nme5

NDP kinase homolog 5; IPIA-β

 

ENSTRUP00000001405

Scaffold_126

261,197-263,042

 

T. nigroviridis

Nme5

NDP kinase homolog 5; IPIA-β

CAG01205

ENSTNIP00000013421

Chr 1

943,305-945,715

 

C. intestinalis

Nme6

NDK 6; IPIA-α

XP_002129729

ENSCINP00000027945†

Scaffold_1779

5,509-6,021

 

B. floridae

Nme6

 

XP_002217997

 

Chr Un

307,935,668-307,942,172

 

P. marinus

Nme6

 

EE741045*

   
 

H. sapiens

NME6

IPIA-α; NDK-H6; NM23-H6

NP_005784

ENSP00000307125

Chr 3

48,310,595-48,317,852

 

M. musculus

Nme6

NDK-6; Nm23-M6

NP_061227

ENSMUSP00000035053

Chr 9

109,735,308-109,745,475

Nme6

G. gallus

Nme6

NDK 6; IPIA-α

XP_424474

ENSGALP00000015875

Chr 1

96,907-98,947

 

A. carolinensis

Nme6

NDK 6; IPIA-α

 

ENSACAP00000008165

Scaffold_2735

3,138-10,113

 

X. tropicalis

Nme6

NDK 6; IPIA-α

NP_001123709

ENSXETP00000034257

Scaffold_857

287,305-293,502

 

D. rerio

Nme6

Ndpkz6

NP_571672

ENSDARP00000094574

Chr 20

19,668,343-19,681,489

 

O. latipes

Nme6

NDK 6; IPIA-α

 

ENSORLP00000020366

Chr 24

13,630,759-13,633,495

 

G. aculeatus

Nme6

NDK 6; IPIA-α

 

ENSGACP00000014120

GroupXVIII

10,683,098-10,684,634

 

T. rubripes

Nme6

NDK 6; IPIA-α

 

ENSTRUP00000019600

Scaffold_72

321,734-323,012

 

T. nigroviridis

Nme6

NDK 6; IPIA-α

CAG09120†

ENSTNIP00000019439

Chr 14

5,693,013-5,693,908

 

C. intestinalis

Nme7

NDK/DM44

NP_001155162

ENSCINP00000025129†

Chr 1p

3,423,461-3,424,231

 

B. floridae

Nme7

 

XP_002244666

 

Chr Un

788,282,087-788,292,883

 

H. sapiens

NME7

NDK-7; NM23-H7

NP_037462

ENSP00000356785

Chr 1

167,368,399-167,603,810

 

M. musculus

Nme7

NDK-7; Nm23-M7

NP_612187

ENSMUSP00000027862

Chr 1

166,237,803-166,334,805

 

G. gallus

Nme7

NDK-7

 

ENSGALP00000024531

Chr 1

87,015,645-87,088,484

Nme7

A. carolinensis

Nme7

NDK-7

 

ENSACAP00000008165

Scaffold_2735

3,138-10,113

 

X. tropicalis

Nme7

MGC75677

NP_988903

ENSXETP00000005150

Scaffold_169

1,646,165-1,680,298

 

D. rerio

Nme7

Ndpkz4; Ndpkz7

NP_571004

ENSDARP00000073091

Chr 6

20,659,126-20,718,810

 

O. latipes

Nme7

 

DK039970*

ENSORLP00000019661†

Chr 4

29,680,976-29,697,346

 

G. aculeatus

Nme7

NDK 7

 

ENSGACP00000018067

GroupVIII

17,708,704-17,717,807

 

T. rubripes

Nme7

NDK 7

 

ENSTRUP00000012937

Scaffold_13

352,791-361,358

 

T. nigroviridis

Nme7

NDK 7

 

ENSTNIP00000004782

Chr 1

10,762,024-10,774,089

 

C. intestinalis

Nme8

TXNDC3; CiIC3

NP_001027618

ENSCINP00000013583

Chr 9q

3,694,058-3,703,935

 

B. floridae

Nme8

 

XP_002217610

 

Chr Un

302,074,149-302,085,811

 

H. sapiens

NME8

TXNDC3; CILD6; NM23-H8; SPTRX2

NP_057700

ENSP00000199447

Chr 7

37,854,724-37,906,525

 

M. musculus

Nme8

Txndc3; Sptrx2

NP_853622

ENSMUSP00000089358

Chr 13

19,736,950-19,789,629

 

G. gallus

Nme8

TXNDC3

XP_426021

ENSGALP00000019704

Chr 2

46,221,676-46,240,899

Nme8

A. carolinensis

Nme8

TXNDC3; Sptrx-2

 

ENSACAP00000017404

Scaffold_28

5,222,555-5,265,400

 

X. tropicalis

Nme8

TXNDC6; Txl-2

NP_001121456

ENSXETP00000002355

Scaffold_664

444,670-467,036

 

D. rerio

Nme8

zgc:162216

NP_001082944

 

Chr13

17,124,355-17,152,394

 

O. latipes

Nme8

TXNDC6; Txl-2

 

ENSORLP00000020619

Chr 21

22,030,361-22,038,307

 

G. aculeatus

Nme8

TXNDC6; Txl-2

 

ENSGACP00000008024

GroupXVI

11,682,650-11,688,299

 

T. rubripes

Nme8

TXNDC6; Txl-2

 

ENSTRUP00000026461

Scaffold_46

902,376-907,179

 

T. nigroviridis

Nme8

TXNDC6; Txl-2

CAG09297

ENSTNIP00000019567

Chr 2

14,973,997-14,979,390

 

H. sapiens

Nme9

TXNDC6, TXL-2

NP_835231

ENSP00000321929

Chr 3

137,980,279-138,048,205

Nme9

M. musculus

Nme9

TXL-2

XP_893103

 

Chr 9

99,360,108-99,371,350

 

B. taurus

Nme9

TXNDC6

NP_001069083

ENSBTAP00000017071

Chr 1

132,828,887-132,856,623

 

C. intestinalis

Nme10

XRP2

XP_002121234†

ENSCINP00000026020

Chr 14q

3,012,876-3,017,751

 

B. floridae

Nme10

 

XP_002243612

 

Chr Un

778,883,396-778,885,823

 

H. sapiens

NME10

RP2; TBCCD2

NP_008846

ENSP00000218340

Chr X

46,696,347-46,741,793

 

M. musculus

Nme10

Rp2h

NP_598430

ENSMUSP00000111049

Chr X

19,941,607-19,982,781

 

G. gallus

Nme10

RP2; XRP2_CHICK

NP_001008680

ENSGALP00000026942

Chr 1

134,314,101-134,332,289

Nme10

A. carolinensis

Nme10

XRP2

 

ENSACAP00000011842

Scaffold_571

329,765-343,988

 

X. tropicalis

Nme10

XRP2

 

ENSXETP00000008933

Scaffold_253

956,431-969,596

 

D. rerio

Nme10

RP2

NP_998611

ENSDARP00000065116

Chr 6

40,312,188-40,323,321

 

O. latipes

Nme10

XRP2

 

ENSORLP00000020082

Chr 4

30,358,786-30,362,942

 

G. aculeatus

Nme10

RP2

 

ENSGACP00000018275

GroupVIII

18,001,999-18,006,009

 

T. rubripes

Nme10

XRP2

 

ENSTRUP00000027655

Scaffold_13

677,342-680,474

 

T. nigroviridis

Nme10

XRP2

CAG01390

ENSTNIP00000013571

Chr 1

11,019,475-11,022,175

  1. Protein names were retrieved from Genbank, Ensembl, iHOP and ZFIN. Location was obtained using Ensembl genome browser, or by UCSC Genome Bioinformatics BLAT when not available on Ensembl. *, sequence is an EST. †, incomplete sequence.