The power of phylogenetic approaches to detect horizontally transferred genes

Table 2 Bipartitions that are shared by the majority of the families in the original dataset.

bipartition	% of families that support bipartition	Number of families with conflicting bipartition at
		70%	80%	90%	95%	99%
...........**	98	0	0	0	0	0
........***..	98	0	0	0	0	0
..**.........	94	1	0	0	0	0
........**...	92	3	3	0	0	0
...........	90	0	0	0	0	0
...........	88	2	2	0	0	0
.......**..	78	10	9	5	3	2
.........**	56	5	3	0	0	0

Numbers give the percent of gene families that support the indicated consensus bipartitions with more than 70% bootstrap support, and the number of gene families that support at least one conflicting bipartition with more than 70% bootstrap support. Bipartitions are indicated in the style used in PHYLIP [32], the order of genomes is as listed in Table 1.

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