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Table 1 List of the organisms (sorted by their taxonomy) used to compare gene order and to identify all orthologs

From: Assessing the evolutionary rate of positional orthologous genes in prokaryotes using synteny data

Abbv

Domain

Species name

Aerpe

Archaea

Aeropyrum pernix

Sulso

Archaea

Sulfolobus solfataricus

Pyrae

Archaea

Pyrobaculum aerophilum

Arcfu

Archaea

Archaeoglobus fulgidus

Halma

Archaea

Haloarcula marismortui

Halob

Archaea

Halobacterium sp

Metth

Archaea

Methanothermobacter thermautotrophicus

Metja

Archaea

Methanocaldococcus jannaschii

Metac

Archaea

Methanosarcina acetivorans

Metka

Archaea

Methanopyrus kandleri

Theko

Archaea

Thermococcus kodakarensis

Pyrab

Archaea

Pyrococcus abyssi

Picto

Archaea

Picrophilus torridus

Theac

Archaea

Thermoplasma acidophilum

Naneq

Archaea

Nanoarchaeum equitans

Symth

Bacteria

Symbiobacterium thermophilum

Trowh

Bacteria

Tropheryma whipplei

Corgl

Bacteria

Corynebacterium glutamicum

Leixy

Bacteria

Leifsonia xyli

Mycle

Bacteria

Mycobacterium leprae

Myctu

Bacteria

Mycobacterium tuberculosis

Strco

Bacteria

Streptomyces coelicolor

Biflo

Bacteria

Bifidobacterium longum

Aquae

Bacteria

Aquifex aeolicus

Bacth

Bacteria

Bacteroides thetaiotaomicron

Porgi

Bacteria

Porphyromonas gingivalis

Chlte

Bacteria

Chlorobium tepidum

Chlmu

Bacteria

Chlamydia muridarum

Chltr

Bacteria

Chlamydia trachomatis

Chlpn

Bacteria

Chlamydophila pneumoniae

Parac

Bacteria

Parachlamydia species

Dehet

Bacteria

Dehalococcoides ethenogenes

Glovi

Bacteria

Gloeobacter violaceus

Synec

Bacteria

Synechocystis species

Theel

Bacteria

Thermosynechococcus elongatus

Nosto

Bacteria

Nostoc species

Proma

Bacteria

Prochlorococcus marinus

PromM

Bacteria

Prochlorococcus marinus

Deira

Bacteria

Deinococcus radiodurans

Theth

Bacteria

Thermus thermophilus

Bacha

Bacteria

Bacillus halodurans

Bacsu

Bacteria

Bacillus subtilis

Oceih

Bacteria

Oceanobacillus iheyensis

Lisin

Bacteria

Listeria innocua

Staau

Bacteria

Staphylococcus aureus

Entfa

Bacteria

Enterococcus faecalis

Lacla

Bacteria

Lactococcus lactis

Strpn

Bacteria

Streptococcus pneumoniae

Strpy

Bacteria

Streptococcus pyogenes

Cloac

Bacteria

Clostridium acetobutylicum

Clote

Bacteria

Clostridium tetani

Thete

Bacteria

Thermoanaerobacter tengcongensis

Oniye

Bacteria

Phytoplasma asteris

Mycge

Bacteria

Mycoplasma genitalium

Mycpe

Bacteria

Mycoplasma penetrans

Mycpn

Bacteria

Mycoplasma pneumoniae

Mycpu

Bacteria

Mycoplasma pulmonis

Ureur

Bacteria

Ureaplasma parvum

Mesfl

Bacteria

Mesoplasma florum

Fusnu

Bacteria

Fusobacterium nucleatum

Pirel

Bacteria

Rhodopirellula baltica

Caucr

Bacteria

Caulobacter crescentus

Braja

Bacteria

Bradyrhizobium japonicum

Rhopa

Bacteria

Rhodopseudomonas palustris

Brume

Bacteria

Brucella melitensis

Meslo

Bacteria

Mesorhizobium loti

Agrtu

Bacteria

Agrobacterium tumefaciens

Sinme

Bacteria

Sinorhizobium meliloti

Anama

Bacteria

Anaplasma marginale

Ricco

Bacteria

Rickettsia conorii

Ricpr

Bacteria

Rickettsia prowazekii

Wolba

Bacteria

Wolbachia pipientis

Zymmo

Bacteria

Zymomonas mobilis

Borbr

Bacteria

Bordetella bronchiseptica

Ralso

Bacteria

Ralstonia solanacearum

Neime

Bacteria

Neisseria meningitidis

Niteu

Bacteria

Nitrosomonas europaea

Bdeba

Bacteria

Bdellovibrio bacteriovorus

Desps

Bacteria

Desulfotalea psychrophila

Desvu

Bacteria

Desulfovibrio vulgaris

Geosu

Bacteria

Geobacter sulfurreducens

Sheon

Bacteria

Shewanella oneidensis

Blofl

Bacteria

Blochmannia floridanus

Buchn

Bacteria

Buchnera aphidicola

Escco

Bacteria

Escherichia coli

Salen

Bacteria

Salmonella enterica

Wiggl

Bacteria

Wigglesworthia glossinidia

Yerpe

Bacteria

Yersinia pestis

Coxbu

Bacteria

Coxiella burnetii

Haein

Bacteria

Haemophilus influenzae

Pasmu

Bacteria

Pasteurella multocida

Acine

Bacteria

Acinetobacter species

Pseae

Bacteria

Pseudomonas aeruginosa

Fratu

Bacteria

Francisella tularensis

Vibch

Bacteria

Vibrio cholerae

Vibpa

Bacteria

Vibrio parahaemolyticus

Xanax

Bacteria

Xanthomonas axonopodis

Xylfa

Bacteria

Xylella fastidiosa

Camje

Bacteria

Campylobacter jejuni

HelpJ

Bacteria

Helicobacter pylori

Helpy

Bacteria

Helicobacter pylori

Wolsu

Bacteria

Wolinella succinogenes

Lepin

Bacteria

Leptospira interrogans

Borbu

Bacteria

Borrelia burgdorferi

Trede

Bacteria

Treponema denticola

Trepa

Bacteria

Treponema pallidum

Thema

Bacteria

Thermotoga maritima