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Table 2 Homology-based functional characterization of the 5' flanking genes

From: Analysis of gene order data supports vertical inheritance of the leukotoxin operon and genome rearrangements in the 5' flanking region in genus Mannheimia

Ortholog

Size (aa)

SWISS-PROT

COG

COG annotation

hslV

173

[SWISS-PROT:P49617]

5405

ATP-dependent protease HslVU (ClpYQ), peptidase subunit

hslU

440

[SWISS-PROT:P32180]

1220

ATP-dependent protease HslVU (ClpYQ), ATPase subunit

lapB

225

[SWISS-PROT:P32181]

2990

Uncharacterized protein conserved in bacteria

artI/artJ

237

[SWISS-PROT:P49618]

0834

ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

xylA

439

 

2115

Xylose isomerase

xylB

484

 

1070

Sugar (pentulose and hexulose) kinases