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Table 2 The sequenced chloroplast genome features

From: Thirteen Camelliachloroplast genome sequences determined by high-throughput sequencing: genome structure and phylogenetic relationships

Complete genomes

Matched reads (bp)

Genome size (bp)

Mean coverage

LSC length (bp)

SSC length (bp)

IR length (bp)

GC content (%)

C. grandibracteata

24,127,775

157,127

154

86,657

18,286

26,092

37.29

C. leptophylla

26,635,918

157,102

170

86,648

18,276

26,089

37.30

C. sinensis var. dehungensis

24,978,790

157,110

159

86,656

18,276

26,089

37.30

C. sinensis var. sinensis

111,673,521

157,117

711

86,663

18,276

26,089

37.29

C. sinensis var. pubilimba

7,753,104

157,086

49

86,679

18,267

26,096

37.30

C. petelotii

9,358,318

157,121

60

86,660

18,283

26,089

37.29

C. pubicosta

36,142,305

157,076

230

86,650

18,280

26,073

37.30

C. reticulata

56,357,778

156,971

359

86,606

18,235

26,065

37.30

C. oleifera

8,162,492

157,145

52

86,676

18,291

26,089

37.28

C. sinensis var. assamica

2,828,916

157,121

18

86,651

18,286

26,092

37.29

C. taliensis

2,828,754

157,087

18

86,650

18,287

26,075

37.29

Incomplete genomes

Matched reads (bp)

Predicted genome size (bp)

Mean coverage

Number of gaps

Gap length (bp)

  

C. crassicolumna var. crassicolumna

6,595,133

157,100

42

180

40,530

  

C. fangchengensis

39,446,507

157,364

251

138

30,491

  

C. kwangsiensis

8,553,876

156,992

54

207

36,424

  

C. ptilophylla

8,426,943

157,057

54

148

22,817

  

C. tachangensis

5,504,058

157,009

35

345

57,250

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