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Table 1 U6 subhaplogroups

From: The history of the North African mitochondrial DNA haplogroup U6 gene flow into the African, Eurasian and American continents

Region1

  

MAG

MAG

EAF

MAG

COS

CAN

MAG

MED

References2

Population3

Sample size

%U6

U6a without 235

U6a 235

U6a189 without 239

U6a189 239

U6b4

U6b1

U6d4

U6c

 

BRA

1400

0.57

12.5

-

87.5

-

-

-

-

-

18, 92, 101, 107, 126, 151, 164, 170, 191

HIS 5

4652

0.62

11.4

5.7

5.7

2.9

-

65.7

2.9

5.7

28, 31, 32, 42, 43, 47, 50, 51, 61, 88, 91, 98, 100, 116, 128, 133, 140, 146, 150, 177, 179, 181, 182, 183, 184, 201

HUS

1062

0.75

-

-

25.0

-

25.0

37.5

12.5

-

12, 47, 67, 117, 187, 216

AUS 5

1938

0.62

14.3

-

78.6

7.1

-

-

-

-

11, 72, 76, 117, 192

CUS 5

1959

0.31

12.5

-

50.0

31.3

6.3

-

-

-

10, 117, 132, 192

POR

1187

2.53

10.0

23.3

20.0

23.3

6.7

3.3

13.3

-

62, 93, 153, 154

AZO

471

2.55

33.3

-

16.7

8.3

8.3

-

33.3

-

40, 185, 186

MAD

155

3.23

60.0

-

20.0

-

-

-

20.0

-

40

CAV

323

3.10

20.0

-

70.0

-

10.0

-

-

-

39

SPA

4110

1.12

23.9

6.5

28.3

8.7

10.9

8.7

10.9

2.2

9, 15, 16, 17, 29, 49, 62, 65, 67, 77, 81, 83, 89, 90, 93, 118, 119, 122, 129, 159, 161, 162, 173, 178, 180, 216

CAN

1040

16.15

4.2

0.6

2.4

1.2

1.2

76.8

1.2

12.5

167, 185, 216

NWE

11409

0.11

16.7

-

33.3

16.7

16.7

-

-

16.7

13, 15, 22, 23, 37, 66, 73, 74, 89, 96, 103, 104, 105, 106, 121, 131, 138, 155, 156, 160, 163, 165, 171, 172, 173, 175, 176, 194, 196, 216

MdC

3680

0.41

33.3

-

46.7

6.7

-

-

13.3

-

8, 24, 30, 41, 46, 71, 81, 84, 85, 86, 87, 136, 139, 149, 157, 173, 195, 197, 204, 205, 207, 209, 211

MdE

8401

0.19

25.0

-

62.5

-

12.5

-

-

-

19, 20, 21, 24, 26, 27, 33, 36, 45, 59, 60, 68, 70, 71, 75, 84, 95, 108, 109, 113, 123, 124, 127, 135, 137, 141, 142, 143, 144, 148, 166, 173, 190, 198, 199, 200, 208, 213, 214, 215

SAM

284

8.10

56.5

-

30.4

8.7

4.3

-

-

-

94, 162, 168, 216

MOR

1508

8.89

30.6

6.0

37.3

9.7

9.7

-

2.2

4.5

15, 34, 63, 64, 81, 102, 162, 168, 169, 198, 203, 216

ALG

299

6.69

15.0

15.0

55.0

5.0

-

-

-

10.0

162, 216

TUN

951

5.36

33.3

-

39.2

19.6

2.0

-

-

5.9

57, 63, 78, 79, 120, 162, 203, 216

NEA

1081

1.57

23.5

-

35.3

23.5

17.6

-

-

-

64, 80, 114, 115, 147, 188, 193, 216

EAF

534

2.62

-

-

100.0

-

-

-

-

-

38, 112, 198, 212, 216

ARP

3224

1.09

11.4

34.3

22.9

-

31.4

-

-

-

1, 2, 3, 4, 5, 6, 7, 14, 55, 63, 112, 145, 189, 198

WAF

3471

1.47

15.7

-

64.7

-

15.7

-

3.9

-

39, 44, 48, 52, 53, 54, 56, 58, 69, 82, 97, 110, 130, 152, 161, 168, 174, 191, 192, 202, 206, 210, 212, 216

CAF

2099

0.43

33.3

-

44.4

-

22.2

-

-

-

52, 56, 76, 94, 152, 206, 212, 216

JEW

2860

0.52

26.7

-

73.3

-

-

-

-

-

25, 26, 35, 36, 145, 158, 159, 198

GYP

944

0.74

-

-

-

42.9

57.1

-

-

-

75, 83, 99, 111, 125, 134

  1. Most probable geographic origins and their frequencies in the regions analyzed.
  2. 1Adscription region: MAG = Maghreb; EAF = East-Africa; COS = Cosmopolitan; CAN = Canary Islands; MED = Mediterranean.
  3. 2References are in Additional file 3.
  4. 3ALG = Algeria; ARP = Arabian peninsula; AZO) = Azores Archipelago; BRA = Brazil; CAN = Canary Islands; CAF = Central Africa; CAV = Cape Verde; EAF = East Africa; GYP = Gypsies; HIS = Iberoamerica; JEW = Jews; MAD = Madeira Islands; MdC = Central Mediterranean; MdE = Eastern Mediterranean; MOR = Morocco; NEA = Northeast Africa; NWE = Northwest Europe; POR = Mainland Portugal; SAM = Sahara and Mauritania; SPA = Spain; TUN = Tunisia; AUS = US Afro-Americans; CUS = Caucasian US Americans; HUS = Hispanic US Americans; WAF = West Africa.
  5. 4U6b = U6b'd, no U6b1, without 16174 and/or 16261; U6d = U6b'd with 16174 or 16261.
  6. 5Complete sequences of this study, presented in the tree (see Additional file 2) where included in subhaplogroup frequencies estimations.