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Table 1 Genetic statistics of Colias PEPCK

From: A genetic polymorphism evolving in parallel in two cell compartments and in two clades

Taxon and form n subset bp S #var π k θ min recs
C. eurytheme
Common exons 2-13 36 Σ 1863 220 255 0.0269 50.06 0.028 60
nss 1424 27 28 0.0027 3.80   
ss 439 193 227 0.1054 46.25   
cyto 5 exon 1 36 Σ 66 3 3 0.0143 0.94 0.011  
nss 54 1 1 0.0010 0.06   
ss 12 2 2 0.0739 0.89   
mito 5 exon 1 36 Σ 33 1 1 0.0154 0.58 0.015  
nss 26 1 1 0.0197 0.51   
ss 7 0 0 0.0000 0.00   
C. meadii
Common exons 2-13 36 Σ 1863 158 173 0.0209 38.89 0.020 41
nss 1424 21 21 0.0020 2.89   
ss 439 137 152 0.0821 36.02   
cyto 5 exon 1 36 Σ 66 1 1 0.0037 0.25 0.004  
nss 54 0 0 0.0000 0.00   
ss 12 1 1 0.0021 0.25   
mito 5 exon 1 36 Σ 33 0 0     
nss 26 0 0     
   ss 7 0 0     
  1. Tabulations done with DnaSP 5.1. Abbreviations: n, total number of alleles sequenced; subset, classes of sites within cDNA; bp, base pairs (per subset); Σ, all substitution sites; ss, synonymous sites; nss, nonsynonymous sites; S, number of segregating sites; #var, number of variants; π, nucleotide diversity per bp; k, average difference of nucleotides, pairwise among sequences (per whole gene); θ, 4N e μ, estimated from S, where Ne is effective population size and μ is mutation rate; min recs, minimum recombinations among sequences, estimated by the four-gamete test [25]; cyto, cytosol; mito, mitochondrial. Mean numbers of pairwise nucleotide differences between species for whole mito form: all sites 52.50, ss sites 47.49, nss sites 5.02. No sites are fixed for different substitutions between the two species.