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Table 1 List of genes included in the study and the number of sequenced chromosomes per population and total for the species (Tot) for each locus

From: Inferring the demographic history of European Ficedula flycatcher populations

   

Pied flycatcher

Collared flycatcher

Locus

ID

Length

Sp

Ge

Sc

Ba

Tot

It

Hu

Cz

Ba

Tot

PSMC2

12884

967

18

22

16

20

76

34

60

24

60

178

ARP6

18851

611

26

32

30

22

110

38

64

22

74

198

RABL4

20454

309

28

28

28

20

104

38

66

30

6

140

ETNK1

21571

643

12

32

18

18

80

28

40

26

20

114

ABHD10

24813

1,008

16

30

22

20

88

28

30

28

70

156

MOSPD2

26743

757

2

22

0

20

44

6

40

8

74

128

KIAA1706

19789

105

4

22

18

22

66

6

38

6

78

128

20904

20904

487

16

30

22

22

90

34

36

24

46

140

UNKNOWN

13093

393

4

0

18

22

44

8

36

0

76

120

CRIPT

16264

666

4

30

18

22

74

12

38

20

74

144

PSMB1

18217

449

28

30

30

22

110

30

40

26

76

172

PPIL4

20195

431

16

24

20

18

78

30

34

22

62

148

DST

26267

829

6

14

0

0

20

20

4

20

72

116

CBPZ

25149

778

4

10

12

12

38

6

38

10

28

82

08235

08235

431

24

26

12

16

78

32

42

28

62

164

PSMD14

18142

325

4

0

12

20

36

6

36

0

80

122

ADAL

06419

509

4

0

20

20

44

6

32

0

20

58

POLR2C

01768

317

4

0

20

22

46

8

32

0

54

94

UNKNOWN

01304

458

20

32

16

20

88

26

36

26

68

156

PSMD6

11836

514

18

32

22

22

94

26

38

22

78

164

HARS

01152

703

22

20

22

22

86

36

68

30

74

208

WDR24

03862

759

20

14

22

16

72

30

58

30

72

190

02419

02419

532

4

0

16

22

42

8

32

0

22

62

HEPACAM

00574

183

22

22

30

18

92

36

40

26

58

160

Sum

 

13,164

326

472

444

458

1,700

532

978

428

1,404

3,342

  1. Sp = Spain, Ge = Germany, Sc = Scandinavian mainland, Ba = Baltic Sea islands, It = Italy, Cz = Czech Republic. The ID given is the five last figures in the orthologous transcript identifier in the chicken genome assembly (ENSGALG000000xxxxx) according to Backström et al.[23].