Table 1 Summary of the identified somatostatin receptor sequences analyzed in this study
Genus and species (genome assembly version) | Assigned sequence names | Chromosome/linkage group /genomic scaffold locations | |
|---|---|---|---|
Mammals | Homo sapiens | Human SSTR1 | 14: 38.68 Mb |
(GRCh37) | Human SSTR2 | 17: 71.16 Mb | |
Human SSTR3 | 22: 37.60 Mb | ||
Human SSTR4 | 20: 23.02 Mb | ||
Human SSTR5 | 16: 1.12 Mb | ||
Mus musculus | Mouse SSTR1 | 12: 59.31 Mb | |
(NCBIM37) | Mouse SSTR2 | 11: 113.48 Mb | |
Mouse SSTR3 | 15: 78.37 Mb | ||
Mouse SSTR4 | 2: 148.22 Mb | ||
Mouse SSTR5 | 17: 25.63 Mb | ||
Canis familiaris | Dog SSTR1 | 8: 19.58 Mb | |
(BROAD2) | Dog SSTR2 | 9: 10.00 Mb | |
Dog SSTR3 | 10: 30.40 Mb | ||
Dog SSTR5 | 6: 42.65 Mb | ||
Monodelphis domestica | Opossum SSTR1 | 1: 278.65 Mb | |
(BROADO5) | Opossum SSTR2 | 2: 217.49 Mb | |
Opossum SSTR3 | 8: 91.98 Mb | ||
Opossum SSTR4 | 1: 598.18 Mb | ||
Opossum SSTR5 | 6: 153.47 Kb | ||
Birds | Gallus gallus | Chicken SSTR1 | 5: 39.75 Mb |
(WASHUC2) | Chicken SSTR2 | 18: 9.00 Mb | |
Chicken SSTR3 | 1: 53.39 Mb | ||
Chicken SSTR4 | 3: 3.27 Mb | ||
Chicken SSTR5 | 14: 5.64 Mb | ||
Reptiles | Anolis carolinensis | Anole lizard SSTR1 | a |
(AnoCar2.0) | Anole lizard SSTR2 | 2: 96.75 Mb | |
Anole lizard SSTR3 | 5: 22.84 Mb | ||
Anole lizard SSTR5 | GL343263.1: 1.76 Mb | ||
Amphibians | Xenopus tropicalis | Frog SSTR1 | GL172781.1: 1.07 Mb |
(JGI_4.2) | Frog SSTR2 | GL172812.1: 1.79 Mb | |
Frog SSTR3 | GL172724.1: 1.41 Mb | ||
Frog SSTR4 | GL172884.1: 512.43 Kb | ||
Frog SSTR5 | GL172659.1: 446.17 Kb | ||
Coelacanth | Latimeria chalumnae | Coelacanth SSTR1 | JH126598.1: 0.53 Mb |
(LatCha1) | Coelacanth SSTR2 | JH126581.1: 3.45 Mb | |
Coelacanth SSTR3 | JH129649.1: 0.21 Mb | ||
Coelacanth SSTR4 | JH126648.1: 2.61 Mb | ||
Coelacanth SSTR5 | JH129247.1: 0.21 Mb | ||
Coelacanth SSTR6 | JH127490.1: 0.26 Mb | ||
Coelacanth SSTRX | JH126581.1: 3.47 Mb | ||
Spotted gar | Lepisosteus oculatus | Spotted gar SSTR1 | LG7: 4.44 Mb |
(LepOcu1) | Spotted gar SSTR2 | LG10: 34.84 Mb | |
Spotted gar SSTR3 | LG12: 34.19 Mb | ||
Spotted gar SSTR5 | LG13: 4.69 Mb | ||
Spotted gar SSTR6 | LG28: 1.08 Mb | ||
Teleost fish | Danio rerio | Zebrafish SSTR1 | 17: 10.35 Mb |
(Zv9) | Zebrafish SSTR2a | 3: 63.08 Mb | |
Zebrafish SSTR2b | 12: 1.73 Mb | ||
Zebrafish SSTR3a | 3: 29.75 Mb | ||
Zebrafish SSTR3b | Scaffold Zv9_NA631: 3.42 Kb | ||
Zebrafish SSTR5a | 24: 16.78 Mb | ||
Zebrafish SSTR5b | 1: 55.01 Mb | ||
Zebrafish SSTR6 | 7: 19.63 Mb | ||
Gasterosteus aculeatus | Stickleback SSTR2a | groupXI: 9.50 Mb | |
(BROADS1) | Stickleback SSTR2b | groupV: 6.81 Mb | |
Stickleback SSTR3a | groupXI: 15.59 Mb | ||
Stickleback SSTR5a | groupXI: 11.72 Mb | ||
Stickleback SSTR5b | groupIX: 14.95 Mb | ||
Stickleback SSTR6 | scaffold_47: 436.21 Kb | ||
Oryzias latipes | Medaka SSTR2a | 8: 10.93 Mb | |
(MEDAKA1) | Medaka SSTR2b | scaffold5841: 160 bp | |
Medaka SSTR3a | 8: 2.80 Mb | ||
Medaka SSTR3b | 1: 29.10 Mb | ||
Medaka SSTR5a | 8: 13.75 Mb | ||
Tetraodon nigroviridis | Green puffer SSTR2a | 3: 10.44 Mb | |
(TETRAODON8) | Green puffer SSTR2b | 2: 4.83 Mb | |
Green puffer SSTR3a | 3: 15.06 Mb | ||
Green puffer SSTR3b | 18: 10.39 Mb | ||
Green puffer SSTR3c | Un_random: 59.49 Mb | ||
Green puffer SSTR5b | 18: 2.40 Mb | ||
Takifugu rubripes | Fugu SSTR2a | scaffold_115: 411.36 Kb | |
(FUGU4) | Fugu SSTR2b | scaffold_3: 3.77 Kb | |
Fugu SSTR3a | scaffold_359: 200.56 Kb | ||
Fugu SSTR3b | scaffold_407: 33.36 Kb | ||
Fugu SSTR5b | scaffold_189: 267.65 Kb | ||
Fugu SSTR6 | scaffold_164: 38.74 Kb | ||
Invertebrates | Drosophila melanogaster | Fruit fly Drostar1 | 3L: 18.55 Mb |
(BDGP5) | Fruit fly Drostar2 | 3L: 18.48 Mb |