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Table 3 Likelihood ratio test (LRT) P values for nested Clade model C (CmC) comparisons

From: Complex patterns of divergence among green-sensitive (RH2a) African cichlid opsins revealed by Clade model analyses

Null model Alternative model      
  M1a M2a_rel CmC α CmC β CmC αβ CmC βT
CmC αβMVR & βT < 0.0001 (4) < 0.0001 (2) - - 0.0408 (1) 0.0022 (1)
CmC α & β < 0.0001 (4) < 0.0001 (2) < 0.0001 (1) 0.0226 (1) 0.4251 (1) -
CmC αβ < 0.0001 (3) < 0.0001 (1) - - - -
CmC α 0.0124 (3) 0.0925 (1) - - - -
CmC β < 0.0001 (3) 0.0001 (1) - - - -
CmC βT < 0.0001 (3) 0.0001 (1) - - - -
  1. Degrees of freedom for each LRT are indicated in parentheses.