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Table 1 Putative branch points in salmonid mstn2 introns

From: The salmonid myostatin gene family: a novel model for investigating mechanisms that influence duplicate gene fate

species

mstn2a Intron 1

mstn2a Intron 2

mstn2b Intron 1

mstn2b Intron 2

O. mykiss

NOT FOUND

GGCTGAC 919 (50)

TTCTAAC 484 (138)

NOT FOUND

  

TACTAAT 955 (86)

  

O. tshawytscha

AACTGAC 457 (117)

GGCTGAC 982 (23)

TTCTAAC 443 (138)

NOT FOUND

 

TTCTAAC 478 (138)

   

O. clarki

TTCTAAC 478 (138)

GGCTGAC 891 (23)

  

O. kisutch

TTCTAAC 479 (139)

NOT FOUND

TTCTAAC 484 (138)

NOT FOUND

O. keta

  

TTCTAAC 484 (138)

NOT FOUND

O. nerka

TTCTAAC 478 (138)

GGCTGAC 892 (23)

TTCTAAC 433 (138)

NOT FOUND

S. salar

TTCTAAC 481 (138)

GGCTGAC 895 (23)

TTCTAAC 484 (138)

NOT FOUND

Sv. fontinalis

TTCTAAC 361 (138)

NOT FOUND

  

C. lavaretus

TCCTAAC 463 (123)

NOT FOUND

  

C. clupeaformis

TTCTAAC 463 (123)

NOT FOUND

  

T. arcticus

TTCTAAC 424 (81)

NOT FOUND

  

T. thymallus

TTCTAAC 424 (81)

NOT FOUND

  
  1. Polymorphysms in the known consensus (TNCTRAY; N = any nucleotide, R = A or G, Y = C or T) are bold. Numbers represent the distance (bp) of the first nucleotide within putative sites from the initiator or the 5’ intron boundary (parenthesis). In some instances, two putative branch points were identified.