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Table 3 The average pairwise nucleotide and amino-acid distances for MHC class I and class II genes in the brown bear

From: Evolution of major histocompatibility complex class I and class II genes in the brown bear

 

         K2P nucleotide distance

    Poisson corrected amino acid distance

 

All sites

ABS

Non-ABS

All sites

ABS

Non-ABS

MHC class I

14.7 (1.6)

44.8 (7.6)

10.6 (1.4)

25.0 (4.0)

87.0 (15.7)

17.5 (3.5)

MHC class II DRB

8.2 (1.4)

32.5 (6.5)

2.4 (0.8)

18.1 (3.9)

74.2 (15.6)

6.4 (2.3)

MHC class II DQA

3.0 (1.2)

12.0 (5.3)

0.0

6.2 (3.0)

25.1 (13.2)

0.0

MHC class II DQB

6.4 (1.3)

17.9 (4.6)

3.0 (1.0)

11.1 (3.0)

37.3 (11.7)

3.7 (1.9)

  1. Distances and standard error values are given as percentages per site; standard errors, obtained through 1000 bootstrap replicates, are in parentheses. K2P, Kimura 2-parameter models.