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Figure 1 | BMC Evolutionary Biology

Figure 1

From: Phylogenetics and evolution of Su(var)3-9 SET genes in land plants: rapid diversification in structure and function

Figure 1

An ML phylogenetic tree of plant Su(var)3-9 SET proteins. The numbers above branches are bootstrap percentages >50, and those below are the clade name. The lowercase letter "a, b, c" represent three intronless clades. The name of Su(var)3-9 SET protein sequences is formed through species abbreviation plus SDG (SET-domain protein group) numbering. Species abbreviation: At, Arabidopsis thaliana; Os, Oryza sativa; Pt, Populus trichocarpa; Nt, Nicotiana tabacum; Vv, Vitis vinifera; Rc, Ricinus communis; Pta, Pinus taeda; Sm, Selaginella moellendorfii; Pp, Physcomitrella patens; Cr, Chlamydomonas reinhardtii. The SDG numbering for Arabidopsis thaliana and Oryza sativa are from ChromDB (, and these of other species are numbered in this study. Domain type (see Table 1) within each corresponding clade is depicted on the right. Domain abbreviations: AT, AT_hook; Pre, PreSET; Post, PostSET; ZnF, ZnF_C2H2; TPR, TPR_1.

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