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Table 1 Distribution of candidate tRNase Zs from representative green plants

From: A survey of green plant tRNA 3'-end processing enzyme tRNase Zs, homologs of the candidate prostate cancer susceptibility protein ELAC2

Species

Protein name

   Type

Accession number

   Database

   No. aa+

DICOTS

     

Aquilegia coerulea

AcoTRZ1

   TM-type tRNase ZS

AcoGoldSmith_v1.019418 m.g

   Phytozome

   283

Aquilegia coerulea

AcoTRZ2

   TM-type tRNase ZS

AcoGoldSmith_v1.007495 m.g

   Phytozome

   356

Aquilegia coerulea

AcoTRZ3

   tRNase ZL

AcoGoldSmith_v1.000749 m.g

   Phytozome

   997*

Aquilegia coerulea

AcoTRZ4

   tRNase ZL

AcoGoldSmith_v1.024294 m.g

   Phytozome

   848*

Arabidopsis thaliana

AthTRZ1

   TM-type tRNase ZS

NP_177608.2

   NCBI

   280

Arabidopsis thaliana

AthTRZ2

   TM-type tRNase ZS

NP_178532.2

   NCBI

   354

Arabidopsis thaliana

AthTRZ3

   tRNase ZL

NP_175628.2

   NCBI

   890

Arabidopsis thaliana

AthTRZ4

   tRNase ZL

NP_188247.2

   NCBI

   942

Carica papaya

CpaTRZ1

   TM-type tRNase ZS

evm.TU.supercontig_17.217

   Phytozome

   306

Carica papaya

CpaTRZ2

   TM-type tRNase ZS

evm.TU.supercontig_132.51

   Phytozome

   359*

Carica papaya

CpaTRZ3

   tRNase ZL

evm.TU.supercontig_34.31

   Phytozome

   943*

Citrus clementina

CclTRZ1

   TM-type tRNase ZS

clementine0.9_017657 m.g

   Phytozome

   288

Citrus clementina

CclTRZ2

   TM-type tRNase ZS

clementine0.9_014182 m.g

   Phytozome

   355

Citrus clementina

CclTRZ3

   tRNase ZL

clementine0.9_001700 m.g

   Phytozome

   938

Cucumis sativus

CsaTRZ1

   TM-type tRNase ZS

Cucsa.369470

   Phytozome

   301*

Cucumis sativus

CsaTRZ2

   TM-type tRNase ZS

Cucsa.185180

   Phytozome

   347

Cucumis sativus

CsaTRZ3

   tRNase ZL

Cucsa.359360

   Phytozome

   977

Eucalyptus grandis

EgrTRZ1

   TM-type tRNase ZS

Egrandis_v1_0.020509 m.g

   Phytozome

   309

Eucalyptus grandis

EgrTRZ2

   TM-type tRNase ZS

Egrandis_v1_0.021229 m.g

   Phytozome

   357*

Eucalyptus grandis

EgrTRZ3

   tRNase ZL

Egrandis_v1_0.001658 m.g

   Phytozome

   971

Glycine max

GmaTRZ1

   TM-type tRNase ZS

Glyma20g01480

   Phytozome

   279

Glycine max

GmaTRZ2

   TM-type tRNase ZS

ACU18735.1

   NCBI

   353

Glycine max

GmaTRZ3

   tRNase ZL

Glyma13g43270

   Phytozome

   923*

Glycine max

GmaTRZ4

   tRNase ZL

Glyma15g02070

   Phytozome

   931*

Mimulus guttatus

MguTRZ1

   TM-type tRNase ZS

mgv1a010642 m.g

   Phytozome

   306

Mimulus guttatus

MguTRZ2

   TM-type tRNase ZS

mgv1a024577 m.g

   Phytozome

   364*

Mimulus guttatus

MguTRZ3

   tRNase ZL

mgv1a000815 m.g

   Phytozome

   976

Vitis vinifera

VviTRZ1

   TM-type tRNase Z S

XP_002273058.1

   NCBI

   290

Vitis vinifera

VviTRZ2

   TM-type tRNase Z S

XP_002277241.1

   NCBI

   354

Vitis vinifera

VviTRZ3

   tRNase ZL

XP_002278956.1

   NCBI

   951

MONOCOTS

     

Oryza sativa japonica

OsaTRZ1

   TM-type tRNase ZS

NP_001046280.1

   NCBI

   302

Oryza sativa japonica

OsaTRZ2

   TM-type tRNase ZS

LOC_Os09g30466

   Phytozome

   365

Oryza sativa japonica

OsaTRZ3

   tRNase ZL

B9EUI7

   UniProt

   964

Zea mays

ZmaTRZ1

   TM-type tRNase ZS

GRMZM2G147727

   Phytozome

   302

Zea mays

ZmaTRZ2

   TM-type tRNase ZS

ACG47847.1

   NCBI

   357

Zea mays

ZmaTRZ3

   tRNase ZL

GRMZM2G379286

   Phytozome

   930

MOSSES

     

Physcomitrella patens

PpaTRZ1

   TM-type tRNase ZS

XP_001785449.1

   NCBI

   295

Physcomitrella patens

PpaTRZ2

   TM-type tRNase ZS

Pp1s17_61V6

   Phytozome

   420

Physcomitrella patens

PpaTRZ3

   Bacterial-type tRNase ZS

Pp1s409_46V6

   Phytozome

   336*

Physcomitrella patens

PpaTRZ4

   tRNase ZL

Pp1s126_39V6

   Phytozome

   984*

Physcomitrella patens

PpaTLP1

   tRNase ZL-like

Pp1s3_568V6

   Phytozome

   923*

LYCOPHYTES

     

Selaginella moellendorffii

SmoTRZ1

   TM-type tRNase ZS

167717

   Phytozome

   299

Selaginella moellendorffii

SmoTRZ2

   tRNase ZL

111409

   Phytozome

   771*

Selaginella moellendorffii

SmoTRZ3

   tRNase ZL

97243

   Phytozome

   819*

Selaginella moellendorffii

SmoTLP1

   tRNase ZS-like

404484

   Phytozome

   303

Selaginella moellendorffii

SmoTLP2

   tRNase-like

XP_002967989

   NCBI

   346

Selaginella moellendorffii

SmoTLP3

   tRNase ZL-like

416540

   Phytozome

   731

GREEN ALGAE

     

Chlamydomonas reinhardtii

CreTRZ1

   TM-type tRNase ZS

Cre10.g431400

   Phytozome

   335

Chlamydomonas reinhardtii

CreTRZ2

   tRNase ZL

Cre01.g039900

   Phytozome

   880*

Chlamydomonas reinhardtii

CreTLP1

   tRNase ZS-like

Cre12.g492250

   Phytozome

   425*

Chlamydomonas reinhardtii

CreTLP2

   tRNase ZS -like

Cre07.g321900

   Phytozome

   378

Chlamydomonas reinhardtii

CreTLP3

   tRNase ZL-like

Cre01.g068350

   Phytozome

   710*

Chlamydomonas reinhardtii

CreTLP4

   tRNase ZL-like

Cre09.g394700

   Phytozome

   1073

Micromonas pusilla

MpuTRZ1

   TM-type tRNase ZS

5692

   JGI

   383*

Micromonas pusilla

MpuTRZ2

   Bacterial-type tRNase ZS

18700

   JGI

   398*

Micromonas pusilla

MpuTRZ3

   tRNase ZL

54013

   JGI

   953*

Micromonas pusilla

MpuTLP1

   tRNase ZL-like

C1N4P0

   UniProt

   866

Ostreococcus lucimarinus

OluTRZ1

   TM-type tRNase ZS

26345

   JGI

   313

Ostreococcus lucimarinus

OluTRZ2

   Bacterial-type tRNase ZS

XP_001416263

   NCBI

   369*

Ostreococcus lucimarinus

OluTRZ3

   tRNase ZL

A4S9E8

   UniProt

   781*

Ostreococcus lucimarinus

OluTLP1

   tRNase ZL-like

A4RR41

   UniProt

   780

Volvox carteri

VcaTRZ1

   TM-type tRNase Z S

80918

   Phytozome

   308*

Volvox carteri

VcaTRZ2

   tRNase ZL

118548

   Phytozome

   881*

Volvox carteri

VcaTLP1

   tRNase ZS-like

103834

   Phytozome

   445*

Volvox carteri

VcaTLP2

   tRNase ZL-like

100314

   Phytozome

   723*

  1. +The number of amino acids in plant tRNase Z and tRNase Z-like proteins.
  2. *Indicates that mispredicted sequences obtained from the databases have been corrected.