Phylogeographic divergence in the widespread delicate skink (Lampropholis delicata) corresponds to dry habitat barriers in eastern Australia

Table 3 Estimates of genetic diversity for the clades present within Lampropholis delicata.

Clade	n	h	Hd	M(S)	π	Tajima's D	Fs	RI	SSD
Clade 1	14	13	0.989	191(187)	0.026	0.378	0.585	0.020	0.033*
1a	2	2	1.0	38(38)	0.016	NA	NA	NA	NA
1b	3	3	1.0	7(7)	0.002	NA	NA	NA	NA
1c	9	8	0.972	19(19)	0.003	-0.305	-2.005	0.063	0.054*
Clade 2	8	7	0.893	12(12)	0.001	-1.576*	-2.870*	0.050	0.010
Clade 3	19	15	0.965	170(164)	0.022	0.617	2.306	0.023	0.024
3a	4	4	1.0	4(4)	0.001	-0.780	-1.872*	0.222	0.042
3b	3	1	0.0	0(0)	0.000	NA	NA	NA	NA
3c	10	8	0.933	54(53)	0.008	0.017	1.044	0.167	0.053
3d	2	2	1.0	4(4)	0.002	NA	NA	NA	NA
Clade 4	48	43	0.996	213(206)	0.017	-0.498	-8.730*	0.002	0.009*
4a	29	24	0.988	119(119)	0.009	-1.006	-3.512	0.005	0.010
4b	14	14	1.0	30(30)	0.003	-1.472	-9.261*	0.015	0.006
4c	5	5	1.0	47(47)	0.011	1.618	0.898	0.280	0.190*
Clade 5	18	13	0.948	87(87)	0.013	0.923	1.974	0.027	0.032
5a	11	7	0.873	18(18)	0.002	-1.597	-0.929	0.113	0.036
5b	7	6	0.952	35(35)	0.006	0.344	0.894	0.034	0.023
Clade 6	4	2	0.500	1(1)	< 0.001	-0.612	0.172	0.250	0.022
Clade 7	55	29	0.937	127(123)	0.005	-1.974*	-4.354	0.026	0.016
7a	3	3	1.0	5(5)	0.001	NA	NA	NA	NA
7b	52	26	0.930	68(68)	0.002	-2.306*	-11.161*	0.033	0.015
Clade 8	2	1	0.0	0(0)	0.000	NA	NA	NA	NA
Clade 9	70	42	0.943	205(201)	0.023	1.184	2.106	0.011	0.025
9a	24	16	0.913	48(48)	0.005	-0.354	-1.561	0.021	0.022
9b	1	1	NA	NA	NA	NA	NA	NA	NA
9c	9	8	0.972	17(17)	0.003	-0.069	-2.070	0.036	0.020
9d	36	17	0.821	24(24)	0.002	-0.851	-5.160*	0.055	0.038
Overall	238	165	0.990	715(625)	0.044

n = sample size, h = number of haplotypes, Hd = haplotypic diversity, M = total number of mutations, S = number of segregating (polymorphic) sites, π = nucleotide diversity, Fs = Fu's F statistic, RI = raggedness index, SSD = sum of squared deviations. Asterisks indicate significant Tajima's D, Fu's F statistic, RI and SSD values.

ISSN: 2730-7182