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Table 3 Standard set of 24 short PCR primer pairs for lophiiforms

From: Evolutionary history of anglerfishes (Teleostei: Lophiiformes): a mitogenomic perspective

No.

Primer a

Sequence (5' to 3')

Reference

1

L1083-12S

ACAAACTGGGATTAGATAC

[47]

 

H2590-16S

ACAAGTGATTGCGCTACCTT

[47]

2

L2949-16S

GGGATAACAGCGCAATC

[47]

 

H3976-ND1

ATGTTGGCGTATTCKGCKAGGAA

[43]

3

L2949-16S

GGGATAACAGCGCAATC

[47]

 

H4432-Met

TTTAACCGWCATGTTCGGGGTATG

[46]

4

L4299-Ile

AAGGRCCACTTTGATAGAGT

This study

 

H5669-Asn

AACTGAGAGTTTGWAGGATCGAGGCC

[53]

5

L4633-ND2

CACCACCCWCGAGCAGTTGA

[47]

 

H5669-Asn

AACTGAGAGTTTGWAGGATCGAGGCC

[53]

6

L5549-Trp

AAGACCAGGAGCCTTCAAAG

This study

 

H6558-CO1

CCKCCWGCKGGGTCAAAGAA

[53]

7

L6205-CO1

TTCCCWCGAATAAATAACATAAG

[87]

 

H7447-Ser

AWGGGGGTTCRATTCCTYCCTTTCTC

[87]

8

L7255-CO1

GATGCCTACACMCTGTGAAA

[47]

 

H8312-Lys

CACCWGTTTTTGGCTTAAAAGGCTAAYGCT

[87]

9

L8202-CO2

TGYGGAGCWAATCAYAGCTT

[87]

 

H9375-CO3

CGGATRATGTCTCGTCATCA

[53]

10

L8343-Lys

AGCGTTGGCCTTTTAAGCTAAWGATWGGTG

[87]

 

H9639-CO3

CTGTGGTGAGCYCAKGT

[47]

11

L8343-Lys

AGCGTTGGCCTTTTAAGCTAAWGATWGGTG

[87]

 

H10019-Gly

CAAGACKGKGTGATTGGAAG

[47]

12

L8343-Lys

AGCGTTGGCCTTTTAAGCTAAWGATWGGTG

[87]

 

H10433-Arg

AACCATGGWTTTTTGAGCCGAAAT

[47]

13

L10054-Gly

CACCWGGTCTTGGTTWAAMTCCMAGGAAAG

This study

 

H11534-ND4M

GCTAGKGTAATAAWKGGGTA

[87]

14

L10440-Arg

AAGATTWTTGATTTCGGCT

[27]

 

H11534-ND4M

GCTAGKGTAATAAWKGGGTA

[87]

15

L11424-ND4

TGACTTCCWAAAGCCCATGTAGA

[47]

 

H12632-ND5

GATCAGGTTACGTAKAGKGC

[47]

16

L12329-Leu

CTCTTGGTGCAAMTCCAAGT

[47]

 

H13396-ND5

CCTATTTTTCGGATGTCTTG

[53]

17

L12329-Leu

CTCTTGGTGCAAMTCCAAGT

[47]

 

H13727-ND5

GCGATKATGCTTCCTCAGGC

[47]

18

L13553-ND5

AACACMTCTTAYCTWAACGC

[53]

 

H14768-CYB

TTKGCGATTTTWAGKAGGGGGTG

[87]

19

L13553-ND5

AACACMTCTTAYCTWAACGC

[53]

 

H15149-CYB

GGTGGCKCCTCAGAAGGACATTTGKCCTCA

[53]

20

L14504-ND6

GCCAAWGCTGCWGAATAMGCAAA

[53]

 

H15560-CYB

TAGGCRAATAGGAARTATCA

[47]

21

L14718-Glu

TTTTTGTAGTTGAATWACAACGGT

This study

 

H15913-Thr

CCGGTSTTCGGMTTACAAGACCG

[87]

22

L15369-CYB

ACAGGMTCAAAYAACCC

[53]

 

H16484-CR

GAGCCAAATGCMAGGAATARWTCA

[87]

23

L15998-Pro

AACTCTTACCMTTGGCTCCCAARGC

[53]

 

H885-12S

TAACCGCGGYGGCTGGCACGA

[87]

24

L16507-CR

TGAWYTATTCCTGGCATTTGGYTC

[87]

 

H1358-12S

CGACGGCGGTATATAGGC

[47]

  1. a L and H denote light and heavy strands, respectively. Positions with mixed bases are labeled with their IUB codes
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