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Table 2 Preliminary ω estimates using available 454 and BAC sequences of putative genes in HmB

From: Signatures of selection in loci governing major colour patterns in Heliconius butterflies and related species

     Pairwise
G#1 Putative gene name Total bps Lineage-wide H. m. malleti v. H. m. cythera H. eratov. H. melpomene H. eratov. H. numata H. numatav. H. melpomene Mean
     bps ωs N S bps ω N S bps ω N S bps ω N S ω
1004 DALR 1242 0.268 1242 0.902 6 2 1242 0.309 32 34 1242 0.308 32 35 1242 0.353 8 6 0.468
1006 DNAJ binding domain 1014 0.062 1014 0 0 3 1014 0.058 5 32 1014 0.087 7 31 1014 0.098 2 7 0.061
1009 similar to bves 285       285 0.020 1 18          0.020
1022 hypothetical protein 441 0.189 441 0.448 11 6 411 0.183 17 30 411 0.148 16 33 411 0.144 4 6 0.231
1021 Phospho-diesterase 1947       1947 0.130 60 139          0.130
1020 sorting nexin 492   492 0 0 0 492 0.019 2 26          0.095
1019 slu7 1719 0.039 1719 0.153 6 16 1353 0.029 8 108 1353 0.031 11 120 1353 0.384 15 14 0.149
1018 kinesin-like 3735 0.393 2355 0.508 18 9 3735 0.290 242 214 1587 0.425 139 68 1587 0.381 11 7 0.401
1017 G-protein receptor 4623       4623 0.052 34 235          0.052
1014 epoxide hydrolase 252 0.219 252 0 0 3 252 0.196 18 31 252 0.081 4 16 252 0.499 10 7 0.194
1028 six/sine homeobox 753       753 0 0 124          0
1037 SCY1-like 2490   1515 0.101 2 6 2490 0.037 15 134          0.069
1036 TM2 domain 528 0 528 0 0 2 528 0 0 16 528 0 0 13 528 0 0 7 0
1035 40 S ribosomal protein 453 0 453 0 0 0 453 0 0 0 453 0 0 13 453 0 0 2 0
1034 NADH 348 0.062 348 0.159 1 2 348 0.095 5 14 348 0.107 5 13 348 0 0 1 0.090
1033 trafficking protein complex 5 558 0.013 558 0 0 0 558 0.013 1 26 558 0.014 1 24 558 0 0 1 0.007
1031 Ras-related 666   279 0 0 0 666 0 0 29          0
1029 THAP domain 1014 0.039 1014 0 0 1 1014 0.055 7 30 1014 0.038 4 28 1014 0.055 2 9 0.037
  Average   0.089   0.162     0.082     0.113     0.174    0.111
  1. 1G#: Unique gene number used in original annotation and in the BAC walk in Fig. 2. Here truncated from original format "HM0..."
  2. Bold formatting indicates ω > 0.18. Other details are as indicated for Table 1.